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Sulcal parameterization

This process performs a length-parameterization of  sulcus meshes. This is useful to study the morphology of sulci and localize features on them.

The sulcus needs to have been identified and labelled automatically or by hand before, and is modeled by a triangular mesh. The result is a coordinate field that localize any point on the mesh of the sulcus with respect to its two extremities. An important constraint is that the sulcus must have only one piece, which is fairly restrictive. So far it has been used on the Central Sulcus and on the Superior Temporal Sulcus after a specific adaptation.

The process produces a coordinate field that can be displayed on the sulcus as well as a text file that contains the depth curve, and the sulcal profile, two descriptors of the sulcus shape. From the sulcal profile it is possible to compute the position of the hand-knob.

The latest version of the process is in the BrainVisa Cortical Surface Toolbox, under the Anatomy category and is called: Sulcal Parameterization 2015. It has been described in the following publication:

Coulon O, Lefèvre J, Klöppel S, Siebner H, Mangin J-F (2015). Quasi-isometric length parameterization of cortical sulci: application to handedness and the central sulcus morphology, 12th IEEE International Symposium on Biomedical Imaging, Brooklin, USA.

 

 

 

Below is a short tutorial to run this process

 UNDER CONSTRUCTION

This process has been used (at least) in the following publications:

Hopkins, W. D., Meguerditchian, A., Coulon, O., Misiura, M., Pope, S., Mareno, M. C., & Schapiro, S. J. (2017). Motor skill for tool-use is associated with asymmetries in Broca’s area and the motor hand area of the precentral gyrus in chimpanzees (Pan troglodytes). Behavioural Brain Research, 318, 71–81. https://doi.org/10.1016/j.bbr.2016.10.048

Gajawelli N, Deoni S, Dirks H, Dean D, O’Muircheartaigh J, Sawardekar S, …, Coulon O*, Lepore N* (* equal senior contribution) (2015). Characterization of the central sulcus in the brain in early childhood. In 37th International Conference of the IEEE Engineering in Medicine and Biology Society.

Leroy, F, Cai, Q, Bogart, S, Dubois, J, Coulon, O, Monzalvo, K, … Dehaene-Lambertz, G (2015). A new human-specific brain landmark : The depth asymmetry of superior temporal sulcus. to appear in Proceedings of the National Academy of Sciences of the United States of America, 112(4):1208-1213.

Coulon O, Lefèvre J, Klöppel S, Siebner H, Mangin J-F (2015). Quasi-isometric length parameterization of cortical sulci: application to handedness and the central sulcus morphology, 12th IEEE International Symposium on Biomedical Imaging, Brooklin, USA.

Hopkins WH, Schaeffer J, Russell J, Bogart S, Meguerditchian A, Coulon O (2015). A Comparative Assessment of Handedness and its Potential Neuroanatomical Correlates in Chimpanzees (Pan troglodytes) and Bonobos (Pan paniscus), to appear in Behaviour, 152(3-4):461-492.

Hopkins WH, Meguerditchian A, Coulon O, Bogart S, Mangin J-F, Sherwood CC, Grabowski MW, Bennett AJ, Pierre PJ, Fears S, Woods R, Hof PR, Vauclair J (2014). Evolution of the Central Sulcus Morphology in Primates, Brain, Behavior, and Evolution, 84:19-30.

Coulon O, Pizzagalli F, Operto G, Auzias G, Delon-Martin C, Dojat M (2011). Two new stable anatomical landmarks on the central sulcus: definition, automatic detection, and their relationship with primary motor functions of the hand, in IEEE EMBC 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, pp.7795-7798, Boston.

Hopkins W, Coulon O, Mangin J-F (2010). Observer-Independent Characterization of Sulcal Landmarks and Depth Asymmetry in the Central Sulcus of the Chimpanzee Brain, Neuroscience, 171(2):544-551.

Cykowski MD, Coulon O, Kochunov PV, Amunts K, Lancaster JL, Laird AR, Glahn DC, Fox PT (2008). The central sulcus: an observer-independent characterization of sulcal landmarks and depth asymmetry, Cerebral Cortex, 18(9):1999-2009.